BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H01LP1|AL430444
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig531 1671 0.0
>3x_Contig531
Length = 2671
Score = 1671 bits (837), Expect = 0.0
Identities = 908/933 (97%), Gaps = 4/933 (0%)
Strand = Plus / Minus
Query: 1 gatcctcaccgc-gtacttcatagtgctgttgaaatcattcatagtcagtttacattgat 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 gatcctcaccgcagtacttcatagtgctgttgaaatcattcatagtcagtttacattgat 1621
Query: 60 tatgtgacagttctgcttttctgacggcactgggaagcttggcgctgattttctttctaa 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 tatgtaacagttctgcttttctgacggcactgggaagcttggcgctgattttctttctaa 1561
Query: 120 atttgtcatctggrtggtgtttctcmgtatgcgagagttttccacgttcgaatgactcct 179
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1560 atttgtcatctggatggtgtttctcagtatgcgagagttttccacgttcgaatgactcct 1501
Query: 180 tgattctcattattttttcgtaatattcgtgtatctcactttctatcgattcaatgttaa 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 tcattctcattattttttcgtaatattcgtgtatctcactttctatcgattcaatgttaa 1441
Query: 240 tcttccccaggtcagataacctattcaaatctcttgtaaaatcgtatatgtcgggg-tat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 1440 tcttccccaggtcagataacctattcaaatctcttgtaaaatcgtatatgtcgaggatat 1381
Query: 299 ttttctctgatgattctttctatcacatgcvaaarggataaattcttatcactgtttgtc 358
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 1380 ttttctctgatgattctttctatcacatgcaaaaaggataaattcttatcactgtttgtc 1321
Query: 359 tttaccatggrgagtttgttcaatgaggaaagtttgataccctgcgttttcttgttgttc 418
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1320 tttaccatggagagtttgttcaatgaggaaagtttgataccctgcgttttcttgttgtcc 1261
Query: 419 ataaagtttccgatctctacgacaatgtagaaaarttgtttgagtctattcgagtttttg 478
||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1260 ataaaaattccgatctctacgacaatgtagaaaaattgtttgagtctatacgagtttttg 1201
Query: 479 atcattgaggtcccatcatcgatcttctgtgattggtacaagatgtcataatagtccttt 538
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1200 atcattgaggtcccatcatcgatcttctgtaattggtacaagatgtcataatagtccttt 1141
Query: 539 tcatatgtcagagcgatcmagagagaggagcttctgattttccagtgatatctcatgttg 598
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1140 tcatatgtcagagcgatcaagagagaggagcttctgattttccagtaatatctcatgttg 1081
Query: 599 tgaaacatttcgaggtatattctatcagctctttccaatttrctgacg-tcttccttcgg 657
| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||
Sbjct: 1080 taaaacatttcgaggtatattctatcagctctttccaatttactgacgttcttctttcgg 1021
Query: 658 agccttaccggttttccaatctgacgcatagggttcgaaagatctaattatactttgggg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 agccttaccggttttccaatctgacgcatagggttcgaaagatctaattatactttgggg 961
Query: 718 gatagtttcgaagtcatccttgttaaagaactcaagaacgctatgattcttgattatatc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gatagtttcgaagtcatccttgttaaagaactcaagaacgctatgattcttgattatatc 901
Query: 778 atcgtcacaccttagtacttttatcaaaaggtcttcaacagaatatgaagaaaacatatg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 atcgtcacaccttagtacttttatcaaaaggtcttcaacagaatatgaagaaaacatatg 841
Query: 838 trggttgattccaaattgttgagccagatcccttgacaaaagag-aactttttcgttctt 896
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 840 taggttgattccaaattgttgagccagatcccttgacaaaagagaaactttttcgttctt 781
Query: 897 cttactagctgtracgttggatttcttcttcat 929
|||||||||||| ||||||||||||||||||||
Sbjct: 780 cttactagctgtaacgttggatttcttcttcat 748
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7211
Number of Sequences: 1807
Number of extensions: 7211
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)